Fsl reg

#!/bin/sh

# Use FSL flirt to register label masks 
# with nearest neighbor interpolation. 
# because the label values should never be interpolated.
# This example assumes: 
# an existing 0.5mm standard brain (MNI152_T1_0.5mm_brain)
# an existing flirt matrix from 1 mm to 0.5 mm (stand1stand0.5.mat)

 flirt -in atlas -datatype int -ref MNI152_T1_0.5mm_brain \
 -interp nearestneighbour \
 -init stand1stand0.5.mat -applyxfm -out atlas_0.5mm

Fsl reg

#!/bin/sh

# Some viewers (like MRIcron) do not handle anisotropic voxels well. 
# FSL can easily convert an image with anisotropic voxels into one 
# with isotropic voxels in the same space using -applyisoxfm

# reslice current image into 1mm isotropic
flirt -in anat_CT_axial -ref anat_CT_axial -applyisoxfm 1 -out anat_CT_axial_1mm

# reslice current image into 0.5 mm isotropic voxels.
flirt -in anat_CT_axial -ref anat_CT_axial -applyisoxfm 0.5 -out anat_CT_axial_0.5mm

Similar codes

0 vote255 views1 answer
Powershell type of object
Shell/Bash
0 vote232 views1 answer
How to uninstall aws cli
Shell/Bash
1 vote197 views1 answer
Batch remove double quotes from argument
Shell/Bash
0 vote186 views1 answer
Sudo systemctl to activate vmgr.service
Shell/Bash
1 vote201 views1 answer
Error: snap "flutter" has "remove-snap" change in progress
Shell/Bash
1 vote190 views1 answer
Cordova live reload
Shell/Bash
0 vote200 views1 answer
Module Error (from ./node_modules/sass-loader/dist/cjs.js): Node Sass version 6.0.0 is incompatible with ^4.0.0 || ^5.0.0.
Shell/Bash
1 vote183 views1 answer
Ec2 ubuntu default password
Shell/Bash
0 vote196 views2 answers
Uninstall kubeadm
Shell/Bash
2 votes192 views1 answer
Ubuntu install okular
Shell/Bash