/Shell/Bash/Bcftools extract information

Bcftools extract information

# Example usage:
bcftools query --format '%CHROM\t%POS\t%INFO/END\t[%GT]\n' input_file.vcf
# Where:
#	- Fixed columns like CHROM and POS are referred to as %COLUMN
#	- Info fields need to be specified as %INFO/TAG
#	- Format fields need to be enclosed in brackets
#	- The tab \t and new line \n characters are used to format the output

Source: samtools.github.io

Similar codes

0 vote180 views1 answer
Sound output raspberry pi
Shell/Bash
0 vote207 views1 answer
Ubuntu gcp packer
Shell/Bash
0 vote281 views2 answers
Cat in bash shell
Shell/Bash
0 vote275 views1 answer
Apache ubuntu Generate CSR stack overflow
Shell/Bash
-2 votes199 views2 answers
Typescript find all imports and exports
Shell/Bash
2 votes180 views1 answer
Mamp connect to mysql
Shell/Bash
0 vote193 views1 answer
Linux cp everything except
Shell/Bash
0 vote269 views1 answer
Merge two branches from different repositories
Shell/Bash
0 vote248 views1 answer
Existing repository
Shell/Bash
8 votes210 views3 answers
Add a user to my myql database
Shell/Bash