/Shell/Bash/Bash add chr to beginning of vcf

Bash add chr to beginning of vcf

# Example usage:
awk '{if($0 !~ /^#/) print "chr"$0; else print $0}' input.vcf
# This converts a vcf file with numeric genome coordinates to one with 
# chr in front of the chromosome number. 

# Note, this command does the opposite operation, if needed:
awk '{gsub(/^chr/,""); print}' input.vcf

Source: biostars.org

Similar codes

0 vote152 views1 answer
Write command in linux
Shell/Bash
0 vote145 views1 answer
Install tools kali linux
Shell/Bash
0 vote166 views1 answer
Ubuntu livepatch fail
Shell/Bash
2 votes134 views2 answers
Subfinder github
Shell/Bash
0 vote168 views1 answer
Telecharger un site avec linux
Shell/Bash
1 vote139 views2 answers
[Errno 13] Permission denied: ubuntu
Shell/Bash
0 vote152 views1 answer
Remove git from angular oproject
Shell/Bash
0 vote206 views1 answer
Site:github.com speedtest web app
Shell/Bash
1 vote174 views2 answers
Openssl p12 to pem
Shell/Bash
0 vote144 views1 answer
Ogv to gif linux
Shell/Bash